STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0278Putative transport protein; Start codon not provided; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (436 aa)    
Predicted Functional Partners:
BAV0279
Putative lipoprotein.
       0.776
gltT
Proton/sodium-glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.774
dctA
Aerobic c4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.773
BAV0277
Putative transport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
    
0.654
BAV0280
Conserved hypothetical protein; Start codon not provided.
       0.640
BAV0281
Conserved hypothetical protein.
       0.636
BAV0283
Conserved hypothetical protein; Start codon not provided.
       0.553
BAV0282
Putative exported protein.
       0.548
sdhD
Succinate dehydrogenase hydrophobic membrane anchor subunit.
   
    0.507
BAV0276
Putative extracellular solute-binding protein.
     
 0.466
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.