STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV0313Fimbrial subunit; Start codon not provided; One of 11 fimbrial subunits. (223 aa)    
Predicted Functional Partners:
fhaD
Fimbrial chaperone protein.
 
 
 0.859
fimC
Outer membrane fimbrial usher protein; Start codon not provided.
 
 
 0.846
lpfB
Fimbrial chaperone.
 
 
 0.839
lpfC
Putative fimbrial usher; Start codon not provided.
 
 
 0.795
fhaC
Hemolysin activator protein; A related gene, hagA (BAVXXX) may function to export the B. avium hemagglutinin, HagB; an additional pair of fhaBC/hagAB genes occurs at BAVXXX.
  
    0.759
fhaB
Filamentous hemagglutinin/adhesin.
  
    0.717
BAV1551
Putative filamentous hemagglutinin/adhesin; Similar to fhaS and fhaL of B. bronchiseptica. It is also located at the same position as B. bronchiseptica fhaS.
  
    0.707
BAV1777
One of 11 fimbrial subunits.
  
  
 0.700
BAV0856
Adhesin.
  
     0.696
BAV0900
Putative adhesin; Start codon not provided.
  
    0.686
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.