STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspMGeneral secretion pathway protein M. (186 aa)    
Predicted Functional Partners:
gspK
General secretion pathway protein K.
  
  
 0.849
gspG
General secretion pathway protein G; Start codon not provided.
  
  
 0.842
gspN
General secretion pathway protein N.
     
 0.830
gspJ
General secretion pathway protein J.
  
  
 0.828
gspI
General secretion pathway protein I.
  
  
 0.825
gspH
General secretion pathway protein H.
  
  
 0.822
gspL
Putative general secretion pathway protein L; Weakly similarity limited to the listed proteins.
     
 0.795
gspC
General secretion pathway protein C.
     
 0.680
gspD
General secretion pathway protein D.
  
  
 0.435
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.