STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0350Putative amino acid transporter. (457 aa)    
Predicted Functional Partners:
wlbJK
Putative membrane protein.
  
 
 0.726
BAV1779
Putative amino acid permease; Start codon not provided.
 
   
 0.661
bvgS
Virulence sensor protein; Start codon not provided.
  
 
 0.654
tyrP
Tyrosine decarboxylase (pseudogene); Unassigned protein domain.
 
  
 0.641
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
 0.595
gltB
Glutamate synthase [NADPH] large chain precursor.
  
  
 0.583
lpdA
Dihydrolipoamide dehydrogenase.
  
 
 0.582
actP
Copper-transporting P-type ATPase.
     
 0.570
gap
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.565
pheA
P-protein [includes: chorismate mutase and prephenate dehydratase].
  
 
 0.549
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.