STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV0352Putative signaling protein. (272 aa)    
Predicted Functional Partners:
BAV1003
Putative signaling protein.
 
 0.859
BAV2132
Putative signaling membrane protein.
 
  
 0.816
BAV1754
Putative signaling protein.
 
  
 0.814
BAV3025
Putative signaling protein.
 
  
 0.814
BAV2681
Putative signaling protein.
  
 
 
 0.811
BAV2133
Putative signaling protein.
 
  
 0.803
BAV1239
Putative signaling protein.
 
  
 0.800
BAV1188
Putative signaling protein.
 
  
 0.797
wspR
Putative signaling/response regulator protein.
 
 
 
 0.715
wlbJK
Putative membrane protein.
  
 
 0.705
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.