virB6 protein (Bordetella avium) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

virB6

Probable conjugal transfer protein. (350 aa)

Predicted Functional Partners:

fhaC

0.874

traG

0.789

BAV0374

0.788

fimC

0.704

sphB1

0.641

traR

0.627

fimD

0.613

lpfC

0.597

hagA2

0.554

BAV0535

0.450

Your Current Organism:

Bordetella avium

NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAV0374	traG	BAV0374	BAV0373	Putative plasmid-related protein; No significant database matches.	Putative conjugal-transfer protein.	0.788
BAV0374	virB6	BAV0374	BAV0372	Putative plasmid-related protein; No significant database matches.	Probable conjugal transfer protein.	0.788
BAV0535	fhaC	BAV0535	BAV1961	Putative outer membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.	Hemolysin activator protein; A related gene, hagA (BAVXXX) may function to export the B. avium hemagglutinin, HagB; an additional pair of fhaBC/hagAB genes occurs at BAVXXX.	0.428
BAV0535	hagA2	BAV0535	BAV2818	Putative outer membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.	Putative hemolysin/hemagglutin accessory protein; Higly similar to BAV2824, HagA (53.4 38d). Also similar to the bordetellae FhaC.	0.597
BAV0535	virB6	BAV0535	BAV0372	Putative outer membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.	Probable conjugal transfer protein.	0.450
fhaC	BAV0535	BAV1961	BAV0535	Hemolysin activator protein; A related gene, hagA (BAVXXX) may function to export the B. avium hemagglutinin, HagB; an additional pair of fhaBC/hagAB genes occurs at BAVXXX.	Putative outer membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.	0.428
fhaC	fimC	BAV1961	BAV1963	Hemolysin activator protein; A related gene, hagA (BAVXXX) may function to export the B. avium hemagglutinin, HagB; an additional pair of fhaBC/hagAB genes occurs at BAVXXX.	Outer membrane fimbrial usher protein; Start codon not provided.	0.999
fhaC	fimD	BAV1961	BAV1962	Hemolysin activator protein; A related gene, hagA (BAVXXX) may function to export the B. avium hemagglutinin, HagB; an additional pair of fhaBC/hagAB genes occurs at BAVXXX.	Fimbrial adhesin.	0.992
fhaC	hagA2	BAV1961	BAV2818	Hemolysin activator protein; A related gene, hagA (BAVXXX) may function to export the B. avium hemagglutinin, HagB; an additional pair of fhaBC/hagAB genes occurs at BAVXXX.	Putative hemolysin/hemagglutin accessory protein; Higly similar to BAV2824, HagA (53.4 38d). Also similar to the bordetellae FhaC.	0.936
fhaC	lpfC	BAV1961	BAV1774	Hemolysin activator protein; A related gene, hagA (BAVXXX) may function to export the B. avium hemagglutinin, HagB; an additional pair of fhaBC/hagAB genes occurs at BAVXXX.	Putative fimbrial usher; Start codon not provided.	0.897
fhaC	sphB1	BAV1961	BAV1641	Hemolysin activator protein; A related gene, hagA (BAVXXX) may function to export the B. avium hemagglutinin, HagB; an additional pair of fhaBC/hagAB genes occurs at BAVXXX.	Autotransporter serine protease (pseudogene); Unassigned protein domain.	0.977
fhaC	virB6	BAV1961	BAV0372	Hemolysin activator protein; A related gene, hagA (BAVXXX) may function to export the B. avium hemagglutinin, HagB; an additional pair of fhaBC/hagAB genes occurs at BAVXXX.	Probable conjugal transfer protein.	0.874
fimC	fhaC	BAV1963	BAV1961	Outer membrane fimbrial usher protein; Start codon not provided.	Hemolysin activator protein; A related gene, hagA (BAVXXX) may function to export the B. avium hemagglutinin, HagB; an additional pair of fhaBC/hagAB genes occurs at BAVXXX.	0.999
fimC	fimD	BAV1963	BAV1962	Outer membrane fimbrial usher protein; Start codon not provided.	Fimbrial adhesin.	0.999
fimC	lpfC	BAV1963	BAV1774	Outer membrane fimbrial usher protein; Start codon not provided.	Putative fimbrial usher; Start codon not provided.	0.926
fimC	sphB1	BAV1963	BAV1641	Outer membrane fimbrial usher protein; Start codon not provided.	Autotransporter serine protease (pseudogene); Unassigned protein domain.	0.749
fimC	virB6	BAV1963	BAV0372	Outer membrane fimbrial usher protein; Start codon not provided.	Probable conjugal transfer protein.	0.704
fimD	fhaC	BAV1962	BAV1961	Fimbrial adhesin.	Hemolysin activator protein; A related gene, hagA (BAVXXX) may function to export the B. avium hemagglutinin, HagB; an additional pair of fhaBC/hagAB genes occurs at BAVXXX.	0.992
fimD	fimC	BAV1962	BAV1963	Fimbrial adhesin.	Outer membrane fimbrial usher protein; Start codon not provided.	0.999
fimD	lpfC	BAV1962	BAV1774	Fimbrial adhesin.	Putative fimbrial usher; Start codon not provided.	0.991