STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0388Hypothetical protein. (208 aa)    
Predicted Functional Partners:
BAV1804
Putative lipoprotein; No significant database matches.
  
     0.749
BAV3379
Putative membrane protein.
  
     0.749
gspN
General secretion pathway protein N.
  
     0.740
BAV2945
Putative transcriptional regulator; Start codon not provided.
  
     0.730
gspJ
General secretion pathway protein J.
  
     0.718
amnA
2-aminophenol 1,6-dioxygenase alpha subunit.
  
     0.671
gtrA
Putative bactoprenol-linked glucose translocase.
  
     0.664
BAV0973
Conserved hypothetical protein.
  
     0.658
BAV1824
Putative transcriptional regulator.
  
     0.643
BAV1284
Putative phage methyltransferase.
  
     0.627
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.