STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0418Putative phage terminase large subunit; Start codon not provided. (512 aa)    
Predicted Functional Partners:
BAV0422
Putative phage head-tail connector protein; Start codon not provided.
 
     0.867
BAV0424
Putative phage endoprotease.
 
     0.842
BAV0429
Phage protein.
 
   
 0.803
BAV0428
Phage protein.
 
     0.791
BAV0417
Putative phage terminase small subunit.
       0.789
BAV0419
Putative phage acetyltransferase; Start codon not provided.
       0.788
BAV0420
Phage protein.
       0.788
BAV0425
Phage protein.
 
     0.773
BAV0433
Putative phage tail fibre protein.
 
   
 0.632
BAV0426
Phage protein.
  
  
 0.578
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.