STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0422Putative phage head-tail connector protein; Start codon not provided. (555 aa)    
Predicted Functional Partners:
BAV0424
Putative phage endoprotease.
 
     0.900
BAV0425
Phage protein.
 
     0.895
BAV0428
Phage protein.
 
    0.874
BAV0418
Putative phage terminase large subunit; Start codon not provided.
 
     0.867
BAV0429
Phage protein.
 
    0.863
BAV0433
Putative phage tail fibre protein.
 
    0.824
BAV0421
Phage protein.
       0.785
BAV0423
Hypothetical phage protein.
       0.573
BAV0420
Phage protein.
       0.535
BAV0419
Putative phage acetyltransferase; Start codon not provided.
       0.534
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.