STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0424Putative phage endoprotease. (224 aa)    
Predicted Functional Partners:
BAV0425
Phage protein.
 
     0.947
BAV0422
Putative phage head-tail connector protein; Start codon not provided.
 
     0.907
BAV0428
Phage protein.
 
     0.896
BAV0429
Phage protein.
 
     0.896
BAV0418
Putative phage terminase large subunit; Start codon not provided.
 
     0.853
BAV0433
Putative phage tail fibre protein.
 
     0.837
BAV0423
Hypothetical phage protein.
       0.804
BAV0426
Phage protein.
       0.732
BAV0427
Phage protein.
       0.666
BAV0430
Phage protein.
       0.548
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.