STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0432Phage-related protein; No significant database matches. (1129 aa)    
Predicted Functional Partners:
BAV0430
Phage protein.
       0.777
BAV0431
Phage protein; Start codon not provided.
       0.773
BAV0428
Phage protein.
       0.757
BAV0429
Phage protein.
       0.757
exbD2
Biopolymer transport protein.
  
 
 0.576
exbD1
Biopolymer transport protein.
  
 
 0.576
tolR
TolR protein.
  
 
 0.576
bfeA
Ferric enterobactin receptor.
  
 
 0.559
BAV0426
Phage protein.
     
 0.549
BAV0427
Phage protein.
       0.548
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.