STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0469Putative heat shock lipoprotein; This CDS is also similar to its adjacent CDS,BAV0470, 36.875 38dentity (39.0730ngapped) in 160 aa overlap. (169 aa)    
Predicted Functional Partners:
BAV2717
Putative thioredoxin.
  
 
   0.626
BAV0476
Putative exported protein.
  
    0.581
BAV0470
Putative heat shock lipoprotein; This CDS is also similar to its adjacent CDS,BAV0469, 36.875 38dentity (39.0730ngapped) in 160 aa overlap.
      
0.569
BAV0851
Putative membrane protein.
  
    0.548
rseA
sigma-E factor negative regulatory protein.
  
     0.548
dltD
Putative D-alanine transferase.
  
     0.542
BAV0471
Rhodanese-like protein; Belongs to the UPF0176 family.
  
    0.533
BAV0467
Putative membrane-associated phosphoesterase.
       0.524
BAV0468
Putative membrane-associated sulfatase.
       0.524
BAV2171
Conserved hypothetical protein; Start codon not provided.
  
     0.516
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.