STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0490Probable alcohol dehydrogenase. (351 aa)    
Predicted Functional Partners:
adhC
Glutathione-dependent formaldehyde dehydrogenase; Deleted EC_number 1.2.1.1; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
0.947
adhB
Alcohol dehydrogenase cytochrome c subunit.
   
 
 0.912
BAV3247
Putative cytochrome C subunit of gluconate dehydrogenase.
   
 
 0.912
BAV0488
Probable short-chain dehydrogenase/reductase.
 
 
 
 0.832
gldA
Probable alcohol dehydrogenase; Start codon not provided.
 
     0.804
BAV0485
Putative branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.778
dad
Putative 2,4'-dihydroxyacetophenone dioxygenase.
       0.751
BAV0486
Putative branched-chain amino acid ABC transporter, ATP-binding protein.
       0.741
BAV0484
Putative branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.716
BAV0483
Putative branched-chain amino acid ABC transporter, periplasmic binding protein.
 
     0.642
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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