STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0496Putative exported protein; This CDS is also similar to its adjacent CDS,BAV0495, 35.041 38dentity (36.0760ngapped) in 488 aa overlap. (482 aa)    
Predicted Functional Partners:
BAV0856
Adhesin.
  
     0.751
fimC
Outer membrane fimbrial usher protein; Start codon not provided.
  
     0.751
fhaD
Fimbrial chaperone protein.
  
     0.735
BAV1777
One of 11 fimbrial subunits.
  
   
 0.705
lpfB
Fimbrial chaperone.
  
     0.677
lpfC
Putative fimbrial usher; Start codon not provided.
  
     0.664
BAV0900
Putative adhesin; Start codon not provided.
  
     0.634
fhaC
Hemolysin activator protein; A related gene, hagA (BAVXXX) may function to export the B. avium hemagglutinin, HagB; an additional pair of fhaBC/hagAB genes occurs at BAVXXX.
  
     0.626
BAV0316
One of 11 fimbrial subunits.
  
   
 0.622
BAV0315
Fimbrial subunit; Start codon not provided; One of 11 fimbrial subunits.
  
   
 0.621
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.