STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0497Conserved hypothetical protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family. (491 aa)    
Predicted Functional Partners:
BAV0501
Putative extracellular solute-binding protein.
 
     0.821
BAV0499
Putative ABC transporter permease protein.
 
     0.673
BAV1001
Putative oligopeptide ABC transporter,oligopeptide-binding protein.
 
     0.640
BAV0498
Putative ABC transpoter ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.632
BAV0500
Putative ABC transporter permease protein.
       0.628
BAV0496
Putative exported protein; This CDS is also similar to its adjacent CDS,BAV0495, 35.041 38dentity (36.0760ngapped) in 488 aa overlap.
       0.513
BAV0502
Conserved hypothetical protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
    
0.488
BAV3375
Low-specificity D-threonine aldolase.
 
     0.487
BAV2950
Conserved hypothetical protein.
 
     0.403
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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