STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0510Putative O-antigen biosynthesis glycosyltransferase; Start codon not provided. (367 aa)    
Predicted Functional Partners:
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
 
 
 0.986
wbpO
Polysaccharide biosynthesis protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.921
cphA1
Cyanophycin synthetase; Also similar to BAV1233, 45.316 38dentity (46.292 ungapped) in 854 aa overlap; Belongs to the MurCDEF family.
  
  
 0.826
cphA2
Cyanophycin synthetase; Also similar to BAV1232, 45.316 38dentity (46.292 ungapped) in 854 aa overlap.
  
  
 0.826
BAV0513
Putative membrane protein.
 
   
 0.762
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
  
 0.753
wbpP
UDP-N-acetylglucosamine C4 epimerase.
  
  
 0.680
BAV0516
Putative O-antigen biosynthesis glycosyltransferase.
 
  
 0.676
BAV0514
Putative O-antigen biosynthesis glycosyltranferase.
 
  
 0.670
BAV0087
Putative lipopolysaccharide biosynthesis protein.
  
  
 0.662
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.