STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0566Putative adenylate cyclase. (528 aa)    
Predicted Functional Partners:
BAV0476
Putative exported protein.
  
    0.647
dltD
Putative D-alanine transferase.
  
     0.619
BAV2248
Conserved hypothetical protein.
  
     0.594
bvgS
Virulence sensor protein; Start codon not provided.
 
   
 0.554
BAV1835
Putative lipoprotein.
  
     0.551
BAV2171
Conserved hypothetical protein; Start codon not provided.
  
     0.531
BAV0886
Putative membrane protein.
  
     0.524
ribB
Putative 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
       0.511
BAV0691
Putative membrane protein.
  
     0.507
BAV0567
IclR-family transcriptional regulator.
 
     0.502
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.