STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0567IclR-family transcriptional regulator. (265 aa)    
Predicted Functional Partners:
BAV0568
Conserved hypothetical protein (partial).
       0.768
BAV0211
IclR-family transcriptional regulator.
  
     0.721
BAV0894
IclR-family transcriptional regulator.
  
     0.720
BAV0041
IclR-family transcriptional regulator; Start codon not provided.
  
     0.690
BAV2574
Putative exported protein.
  
     0.608
BAV0566
Putative adenylate cyclase.
 
     0.505
BAV1080
ABC transporter substrate-binding protein.
  
     0.501
BAV0532
Putative cyclase.
 
     0.492
BAV3295
AraC-family transcriptional regulator.
  
  
 0.484
BAV1082
Putative branched-chain amino acid ABC transporter ATP-binding/permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
     0.448
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.