STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bphD2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. (276 aa)    
Predicted Functional Partners:
bphE
2-keto-4-pentenoate hydratase; Start codon not provided.
 
 
 0.972
BAV0595
Pigment production hydroxylase.
 
  0.847
bphC
2,3-dihydroxybiphenyl 1,2-dioxygenase.
 
  
 0.843
bphF
4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
 
 
 0.810
bphG
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
 
  
 0.796
BAV2918
Putative hydrolase.
  
     0.563
BAV0596
Putative monooxygenase/oxidoreductase.
 
  
 0.513
BAV1606
Putative carboxylesterase.
  
     0.469
hpaH-2
2-oxo-hept-3-ene-1,7-dioate hydratase.
 
  
 0.452
hpaH
2-oxo-hept-3-ene-1,7-dioate hydratase.
 
  
 0.447
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.