STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0606Putative catabolic enzyme. (501 aa)    
Predicted Functional Partners:
BAV0605
Putative membrane protein; No significant database matches.
       0.610
BAV0713
Conserved hypothetical protein.
 
  
 0.608
citE
Citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.604
BAV0607
TetR-family transcriptional regulator.
 
     0.597
BAV0957
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
  
 0.584
bcpA
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
  
 0.582
prpC
2-methylcitrate synthase; Belongs to the citrate synthase family.
  
  
 0.579
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.579
BAV0623
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
  
 0.568
BAV0604
Putative membrane protein.
       0.510
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.