STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0638Putative esterase. (268 aa)    
Predicted Functional Partners:
cysD1
O-acetylhomoserine sulfhydrylase; Almost identical to BAV2830 (98.8 38d).
       0.773
BAV0637
Hypothetical protein; No significant database matches.
 
     0.557
BAV0388
Hypothetical protein.
  
     0.455
BAV0529
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.441
BAV0640
Putative chloride-channel protein.
   
   0.406
apaH
Diadenosine-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.405
BAV0955
Putative isochorismatase hydrolase; Start codon not provided.
  
   0.404
wlbJK
Putative membrane protein.
   
 
 0.401
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.