STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0674N-carbamoyl-D-amino acid hydrolase. (333 aa)    
Predicted Functional Partners:
BAV0676
D-hydantoinase.
 
  
 0.712
BAV0682
Hydantoin racemase.
 
     0.710
BAV0681
Putative dihydrodipicolinate synthase; Belongs to the DapA family.
 
     0.572
wlbJK
Putative membrane protein.
  
 
 0.565
BAV1013
Putative X-Pro dipeptidase.
  
   
 0.552
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
   
 
 0.517
BAV0672
Putative D-isomer specific 2-hydroxyacid dehydrogenase.
  
  
 0.488
purL
Phosphoribosylformylglycinamidine synthase; Start codon not provided; In the N-terminal section; belongs to the FGAMS family.
  
  
 0.484
BAV0673
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.464
BAV0460
Putative amidohydrolase/peptidase/deacetylase.
 
   
 0.445
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.