STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV0674N-carbamoyl-D-amino acid hydrolase. (333 aa)    
Predicted Functional Partners:
BAV0676
D-hydantoinase.
 
  
 0.720
BAV0682
Hydantoin racemase.
 
   
 0.710
BAV0681
Putative dihydrodipicolinate synthase; Belongs to the DapA family.
 
     0.572
BAV1013
Putative X-Pro dipeptidase.
  
     0.548
wlbJK
Putative membrane protein.
  
 
 0.520
BAV0672
Putative D-isomer specific 2-hydroxyacid dehydrogenase.
  
  
 0.491
BAV0673
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.466
BAV0460
Putative amidohydrolase/peptidase/deacetylase.
 
   
 0.445
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
   
  
 0.427
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.