STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0705Conserved hypothetical protein. (281 aa)    
Predicted Functional Partners:
BAV0706
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha.
    0.943
BAV0707
Putative polysaccharide synthesis phosphatase; Start codon not provided.
   
   0.882
glyQ
glycyl-tRNA synthetase alpha chain.
  
    0.877
glyS
glycyl-tRNA synthetase beta chain.
       0.874
BAV0704
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.783
gloA
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
       0.633
citB
Citrate utilization protein B.
       0.561
BAV0703
Putative exported protein.
       0.561
caiD
Carnitinyl-coa dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.469
lptE
Putative lipoprotein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.
  
     0.412
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.