STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
poxBPyruvate dehydrogenase [cytochrome]; Belongs to the TPP enzyme family. (577 aa)    
Predicted Functional Partners:
ilvH
Acetolactate synthase isozyme III small subunit.
 
 0.969
maeB1
NADP-dependent malic enzyme.
  
 
 0.927
maeB
NADP-dependent malic enzyme.
  
 
 0.927
maeB2
NADP-dependent malic enzyme.
  
 
 0.927
lldD
Putative L-lactate dehydrogenase.
  
 
 0.922
lldD-2
L-lactate dehydrogenase.
  
 
 0.922
pykA
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.913
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
    
 0.908
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
    
 0.906
glcD2
Putative glycolate oxidase subunit; Also similar to the downstream CDS, BAV2151,(30.947 38dentity).
   
 0.905
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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