STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0754Conserved hypothetical protein. (125 aa)    
Predicted Functional Partners:
lpfC
Putative fimbrial usher; Start codon not provided.
  
     0.675
BAV1777
One of 11 fimbrial subunits.
  
     0.652
lpfB
Fimbrial chaperone.
  
     0.644
BAV1305
Putative phage protein; Start codon not provided.
  
     0.635
BAV0496
Putative exported protein; This CDS is also similar to its adjacent CDS,BAV0495, 35.041 38dentity (36.0760ngapped) in 488 aa overlap.
  
    0.613
BAV0850
Putative membrane protein.
 
    0.609
BAV0495
Putative exported protein; This CDS is also similar to its adjacent CDS,BAV0496, 35.041 38dentity (36.0760ngapped) in 488 aa overlap.
  
    0.584
BAV1864
Autotransporter; Start codon not provided; Similar to the C-terminal regions of several autotransporters.
  
     0.549
BAV2846
Autotransporter; Shown to be expressed in lab of L. Temple.
  
     0.546
BAV1098
Putative flavodoxin.
   
    0.538
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.