STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdsDNAD-dependent formate dehydrogenase delta subunit. (86 aa)    
Predicted Functional Partners:
fdsA
NAD-dependent formate dehydrogenase alpha subunit.
 
 0.998
fdsG
NAD-dependent formate dehydrogenase gamma subunit.
 
 
 0.995
fdsB
NAD-dependent formate dehydrogenase beta subunit.
 
 
 0.994
hutG
Putative N-formylglutamate amidohydrolase.
  
  
  0.911
fdnG
Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon.
     
 0.906
BAV3288
Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde.
    
  0.905
fmdA
Formamidase.
     
  0.900
kynB
Putative cyclase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation.
     
  0.900
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
BAV2831
Putative lipase/esterase.
     
  0.900
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.