STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0851Putative membrane protein. (137 aa)    
Predicted Functional Partners:
BAV0852
Hypothetical protein.
  
    0.973
BAV0850
Putative membrane protein.
 
  
 0.970
BAV0861
Putative ribonuclease inhibitor.
  
    0.766
rseA
sigma-E factor negative regulatory protein.
  
    0.765
BAV0691
Putative membrane protein.
  
     0.751
BAV2516
Conserved hypothetical protein.
  
     0.724
BAV3276
Putative regulatory protein.
  
     0.720
BAV1186
Conserved hypothetical protein.
  
     0.719
BAV2156
Putative exported protein.
  
     0.719
BAV2761
Putative membrane protein.
  
     0.719
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.