STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0895Putative agmatinase/arginase; Belongs to the arginase family. (296 aa)    
Predicted Functional Partners:
adiA
Biodegradative arginine decarboxylase.
    
 0.917
adiA-2
Biodegradative arginine decarboxylase.
    
 0.917
speG
Spermidine N(1)-acetyltransferase.
     
 0.906
BAV0896
Putative amino acid ABC transporter, periplasmic amino acid-binding protein.
  
  
 0.895
BAV1866
ABC transporter, permease protein.
  
  
 0.761
argH
Argininosuccinate lyase.
     
 0.682
argF
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
    
 0.672
BAV0680
Amino acid ABC transporter, permease protein.
  
  
 0.650
BAV1013
Putative X-Pro dipeptidase.
  
  
 0.634
putA
Bifunctional PutA protein [includes: proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.633
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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