STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV0903LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
xerD
Tyrosine recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.777
BAV0905
Putative regulatory protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.760
BAV0220
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.724
BAV0174
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.713
BAV3190
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.710
BAV0673
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.708
BAV1652
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.703
BAV1565
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.699
macA
Putative macrolide-specific efflux protein (pseudogene); Belongs to the LysR transcriptional regulatory family.
  
     0.696
BAV2905
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.687
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.