STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BAV0956Putative reductase flavoprotein subunit precursor; Start codon not provided; Also similar to BAV3254 (29.2 38d). (465 aa)    
Predicted Functional Partners:
nadC
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family.
  
  
 0.932
BAV0946
ABC transporter, substrate-binding protein.
 
     0.931
BAV0955
Putative isochorismatase hydrolase; Start codon not provided.
 
   
 0.928
hyuB
Hydantoin utilization protein B.
 
     0.924
hyuA
Hydantoin utilization protein A.
 
     0.901
BAV0945
GntR-family transcriptional regulator.
 
     0.872
BAV0957
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
     0.824
BAV0947
ABC transporter, permease protein; Start codon not provided; Belongs to the binding-protein-dependent transport system permease family.
 
     0.823
BAV0948
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.823
BAV0949
ABC transporter, ATP-binding protein; Start codon not provided.
 
     0.822
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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