STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
danD-aminoacylase. (482 aa)    
Predicted Functional Partners:
dsd
Putative D-serine deaminase.
 
   
 0.770
dadA1
D-amino acid dehydrogenase small subunit; Also similar to BAV2005 (31.566 38d), BAV2030 (44.724 38d), BAV2366 (36.170 0d).
     
 0.700
BAV0961
Putative acetolactate synthase large subunit; Start codon not provided; Belongs to the TPP enzyme family.
       0.697
BAV0962
TetR-family transcriptional regulator.
       0.697
BAV0958
Putative exported protein.
       0.416
BAV0588
Conserved hypothetical protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
     0.403
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.