STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV0988Putative exported protein. (316 aa)    
Predicted Functional Partners:
BAV2487
Putative exported protein.
   
    0.961
iorA
Isoquinoline 1-oxidoreductase alpha subunit.
   
    0.952
BAV0885
Putative membrane protein.
 
  
 0.842
BAV1862
Putative membrane protein.
 
  
 0.842
BAV1532
Putative salicylate hydroxylase; Start codon not provided.
   
    0.834
BAV1787
Salicylate hydroxylase.
   
    0.692
BAV0987
Conserved hypothetical protein.
       0.642
BAV2901
Putative membrane protein.
 
  
 0.570
BAV1861
Putative membrane protein.
 
  
 0.549
BAV0989
LysR-family transcriptional regulator; An insertion within codon 40 in this gene results in a mutant strain that does not produce dermonecrotic toxin and has decreased rate of attachment to turkey trachea, in vivo and in vitro; Belongs to the LysR transcriptional regulatory family.
       0.545
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.