STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aatAcyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase precursor. (376 aa)    
Predicted Functional Partners:
BAV1028
Extracellular solute-binding protein.
 
     0.909
BAV2615
Putative poly(aspartic acid) hydrolase.
 
     0.773
BAV2610
ABC transporter, substrate-binding protein.
 
     0.733
BAV2948
Conserved hypothetical protein.
  
     0.607
BAV1915
Probable dioxygenase.
  
     0.570
BAV2433
Conserved hypothetical protein; Start codon not provided.
  
     0.549
BAV1799
GntR-family transcriptional regulator.
  
     0.533
BAV1002
Putative peptidase; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
  
     0.521
BAV2846
Autotransporter; Shown to be expressed in lab of L. Temple.
  
     0.500
BAV1824
Putative transcriptional regulator.
  
     0.495
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.