STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
risATwo component system response regulator. (244 aa)    
Predicted Functional Partners:
risS
Two component system sensor kinase.
 
 0.997
ompB
Osmolarity two component sensor kinase.
 
 0.981
ompR
Osmolarity two component response regulator.
  
  
 
0.905
wlbJK
Putative membrane protein.
  
 
 0.848
irlS
Heavy metal sensing two-component sytem, sensor kinase; Member of a two-component regulatory system.
 
 
 0.816
phoR
Phosphate regulon two-component system sensor kinase.
 
 
 0.773
BAV2116
Two-component sensor kinase.
 
 
 0.770
bvgS
Virulence sensor protein; Start codon not provided.
 
 
0.769
BAV2311
Two-component system sensor kinase.
 
 
 0.756
BAV2907
Two-component sensor kinase.
 
 
 0.747
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.