STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1227Putative membrane protein. (453 aa)    
Predicted Functional Partners:
BAV1226
Putative permease.
 
    0.978
BAV1224
Putative exported protein.
 
  
 0.970
BAV1225
Putative exported protein.
 
    0.930
BAV1228
Conserved hypotheticals protein.
  
    0.628
wlbJK
Putative membrane protein.
     
 0.545
phbF
Putative regulator of Poly-beta-hydroxybutyrate (PHB) biosynthesis.
 
     0.478
actP
Copper-transporting P-type ATPase.
  
  
 0.473
citB
Citrate utilization protein B.
  
  
 0.440
fdnH
Nformate dehydrogenase, iron-sulfur subunit.
  
  
 0.440
bfd
Bacterioferritin-associated ferredoxin.
  
   
 0.428
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.