STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV1311Putative phage protein. (170 aa)    
Predicted Functional Partners:
BAV1310
Putative phage protein; No significant database matches.
       0.605
BAV1309
Putative phage protein; No significant database matches.
       0.568
BAV1305
Putative phage protein; Start codon not provided.
 
     0.566
BAV1308
Putative phage protein; No significant database matches.
       0.560
BAV1473
Putative phage tail tape measure protein.
 
    0.552
BAV1333
Putative phage baseplate protein.
  
     0.519
BAV1307
Putative phage endonuclease.
       0.480
BAV0433
Putative phage tail fibre protein.
  
     0.474
BAV1306
Putative phage protein; No significant database matches.
       0.472
BAV1302
Phage regulatory protein.
       0.471
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.