STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1314Putative phage large subunit terminase; Start codon not provided. (473 aa)    
Predicted Functional Partners:
BAV1317
Phage protein.
 
     0.921
BAV1315
Putative phage portal protein.
 
     0.916
BAV1316
Putative phage head protein.
 
     0.893
BAV1319
Putative phage protein.
       0.829
BAV1318
Phage structural protein; No significant database matches;encodes major structural protein, as shown by N-terminal sequencing of purified protein in L. Temple's lab.
       0.813
BAV1313
Putative phage small subunit terminase.
       0.800
BAV1322
Phage protein.
 
     0.782
BAV1325
Putative phage protein.
 
     0.772
BAV1335
Phage protein.
 
    0.750
BAV1333
Putative phage baseplate protein.
 
     0.710
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.