STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1317Phage protein. (416 aa)    
Predicted Functional Partners:
BAV1316
Putative phage head protein.
 
   
 0.952
BAV1315
Putative phage portal protein.
 
   
 0.951
BAV1314
Putative phage large subunit terminase; Start codon not provided.
 
   
 0.928
BAV1322
Phage protein.
 
     0.887
BAV1325
Putative phage protein.
 
     0.883
BAV1335
Phage protein.
 
     0.838
BAV1329
Putative phage tail tape-measure protein.
 
     0.831
BAV1333
Putative phage baseplate protein.
 
     0.815
BAV1318
Phage structural protein; No significant database matches;encodes major structural protein, as shown by N-terminal sequencing of purified protein in L. Temple's lab.
       0.788
BAV1313
Putative phage small subunit terminase.
       0.782
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.