STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1318Phage structural protein; No significant database matches;encodes major structural protein, as shown by N-terminal sequencing of purified protein in L. Temple's lab. (155 aa)    
Predicted Functional Partners:
BAV1314
Putative phage large subunit terminase; Start codon not provided.
       0.813
BAV1315
Putative phage portal protein.
       0.803
BAV1317
Phage protein.
       0.802
BAV1316
Putative phage head protein.
       0.799
BAV1313
Putative phage small subunit terminase.
       0.773
BAV1319
Putative phage protein.
       0.742
BAV1312
Putative phage DNA-binding protein.
       0.557
BAV1312A
Putative phage protein.
       0.557
BAV1320
Putative phage protein; No significant database matches.
       0.542
BAV1321
Phage protein.
       0.542
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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