STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1335Phage protein. (396 aa)    
Predicted Functional Partners:
BAV1333
Putative phage baseplate protein.
 
 
   0.974
BAV1329
Putative phage tail tape-measure protein.
 
     0.949
BAV1322
Phage protein.
 
     0.863
BAV1325
Putative phage protein.
 
     0.858
BAV1317
Phage protein.
 
     0.838
BAV1316
Putative phage head protein.
 
     0.837
BAV1315
Putative phage portal protein.
 
     0.835
BAV1330
Putative phage protein; No significant database matches.
       0.788
BAV1331
Phage protein.
       0.788
BAV1332
Phage protein.
       0.788
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.