STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1337N-terminus similar to phage tail proteins, such as Burkholderia cenocepacia phage BcepB1A putative tail fiber protein; C-terminus similar to glycine-rich proteins, such as Epstein-Barr virus; ebna-1 nuclear protein; bkrf1 and Mycobacterium tuberculosis H37Rv; pe-pgrs family protein; pe_pgrs13. (382 aa)    
Predicted Functional Partners:
BAV1333
Putative phage baseplate protein.
  
    0.808
BAV1329
Putative phage tail tape-measure protein.
     
 0.795
BAV1335
Phage protein.
       0.781
BAV1334
Phage protein; Start codon not provided.
       0.775
BAV1330
Putative phage protein; No significant database matches.
       0.774
BAV1331
Phage protein.
       0.774
BAV1332
Phage protein.
       0.773
BAV1336
Phage protein.
       0.773
BAV1337A
Putative phage protein.
       0.773
BAV1338
Phage lysozyme.
     
 0.589
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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