Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAV1363Histone deacetylase family protein. (304 aa)    
Predicted Functional Partners:
BAV3390
Conserved hypothetical protein.
 
 0.685
BAV2976
Putative acetyltransferase.
 
     0.653
mltB
Membrane-bound lytic murein transglycosylase B.
       0.642
BAV1835
Putative lipoprotein.
    
 0.637
npdA
NAD-dependent deacetylase (Sir2-like regulatory protein); NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
    
 0.599
etfA1
Electron transfer flavoprotein alpha-subunit; Also similar to BAV3266 (81.9).
   
   0.598
etfB1
Electron transfer flavoprotein beta-subunit; Also similar to- BAV3265 (81.9).
       0.583
ppiB
Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.559
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
    
 0.522
gap
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
  
 0.508
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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