STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfB1Electron transfer flavoprotein beta-subunit; Also similar to- BAV3265 (81.9). (249 aa)    
Predicted Functional Partners:
etf
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.998
etfA1
Electron transfer flavoprotein alpha-subunit; Also similar to BAV3266 (81.9).
 0.994
etfA2
Electron transfer flavoprotein alpha-subunit; Also similar to BAV1365 (75.4).
 0.975
BAV3262
Electron transfer flavoprotein alpha-subunit.
 0.963
BAV1367
Probable acyl-CoA dehydrogenase.
 
 
 0.726
phbB-2
acetoacetyl-CoA reductase; Start codon not provided; Similar to N-terminal half of Escherichia coli probable 3-hydroxybutyryl-coa dehydrogenase paaH SWALL:PAAH_ECOLI (SWALL:P76083) (475 aa) fasta scores: E(): 5.4e-15, 30.79 38d in 328 aa.
  
 
 0.667
BAV1363
Histone deacetylase family protein.
       0.583
BAV3100
Probable FAD-linked oxidase.
  
 
 0.581
gcdH
glutaryl-CoA dehydrogenase.
 
 
 0.576
gltD
Glutamate synthase [NADPH] small chain.
  
 
 0.562
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.