STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfA1Electron transfer flavoprotein alpha-subunit; Also similar to BAV3266 (81.9). (309 aa)    
Predicted Functional Partners:
etf
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.994
etfB1
Electron transfer flavoprotein beta-subunit; Also similar to- BAV3265 (81.9).
 0.993
etfB2
Electron transfer flavoprotein beta-subunit; Also similar to BAV1364 (81.9).
 0.972
BAV3263
Electron transfer flavoprotein beta-subunit.
 
 0.839
BAV1367
Probable acyl-CoA dehydrogenase.
 
 
 0.794
BAV1758
acyl-CoA dehydrogenase; Start codon not provided.
 
 0.793
dcaA
acyl-CoA dehydrogenase.
 
 0.785
ivd
isovaleryl-CoA dehydrogenase.
 
 0.764
BAV0610
acyl-CoA dehydrogenase.
 
 0.758
BAV0226
acyl-CoA dehydrogenase.
 
 0.707
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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