STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
paaGProbable enoyl-CoA hydratase. (262 aa)    
Predicted Functional Partners:
paaD
Phenylacetic acid degradation protein; Start codon not provided.
 
 
 0.988
paaC
Phenylacetic acid degradation protein.
 
 
 0.987
paaA
Phenylacetic acid degradation protein.
 
 
 0.985
paaB
Phenylacetic acid degradation protein.
 
 
 0.982
paaE
Probable phenylacetic acid degradation NADH oxidoreductase.
 
 
 0.977
BAV3222
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.948
paaI
Phenylacetic acid degradation protein.
 
 
 0.931
paaZ
Putative phenylacetic acid degradation aldehyde dehydrogenase.
 
 0.868
dcaH
hydroxyacyl-CoA dehydrogenase.
 0.841
BAV0216
Putative 3-hydroxybutyryl-CoA dehydrogenase.
 0.832
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.