STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
paaK-2Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (438 aa)    
Predicted Functional Partners:
paaI
Phenylacetic acid degradation protein.
 
 
 0.993
paaD
Phenylacetic acid degradation protein; Start codon not provided.
 
  
 0.975
paaA
Phenylacetic acid degradation protein.
 
 
 0.974
paaB
Phenylacetic acid degradation protein.
 
 
 0.974
paaC
Phenylacetic acid degradation protein.
 
 
 0.974
paaE
Probable phenylacetic acid degradation NADH oxidoreductase.
 
 
 0.966
BAV0996
Putative amidase.
    
  0.902
BAV2498
Putative indoleacetamide hydrolase; Start codon not provided; Belongs to the amidase family.
    
  0.901
paaZ
Putative phenylacetic acid degradation aldehyde dehydrogenase.
 
 
 
 0.755
paaG
Probable enoyl-CoA hydratase.
  
  
 0.680
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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