STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1425Phage protein. (284 aa)    
Predicted Functional Partners:
recT-2
Phage recombination protein.
 
  
 0.941
BAV1426
Putative phage protein.
       0.773
BAV1427
Phage protein.
       0.773
recT
Phage recombination protein.
 
  
 0.751
BAV0912
Conserved hypothetical protein.
  
 
 0.714
wssI
Glutamate decarboxylase alpha/beta; Also similar to BAV2797 (80.679id 38d).
  
     0.650
BAV1428
Putative antirepressor.
       0.580
BAV1423C
Putative phage protein; No significant database matches.
       0.559
BAV2642
Putative capsular polysaccharide biosynthesis protein.
 
     0.491
BAV1423
Putative phage integrase; Start codon not provided; Belongs to the 'phage' integrase family.
       0.487
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.