STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1463Putative phage capsid protease. (205 aa)    
Predicted Functional Partners:
BAV1464
Putative major capsid protein.
 
  
 0.962
BAV1462
Putative phage portal protein.
 
   
 0.955
BAV1460
Putative terminase, large subunit.
 
     0.932
BAV1459
Putative terminase, small subunit.
 
   
 0.931
BAV1457
Phage protein.
 
     0.814
BAV1465
Phage protein; Start codon not provided.
     
 0.771
BAV1461
Putative phage protein.
       0.768
BAV1466
Putative head-tail adaptor protein.
     
 0.760
BAV1467
Phage protein.
       0.749
BAV1468
Phage protein.
       0.732
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.