STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1472Phage protein. (102 aa)    
Predicted Functional Partners:
BAV1471
Phage protein.
       0.797
BAV1473
Putative phage tail tape measure protein.
       0.742
BAV1474
Putative phage protein.
       0.712
BAV1470
Putative major tail protein.
       0.708
BAV1475
Putative phage protein.
       0.708
BAV1476
Phage protein.
       0.704
BAV1477
Putative phage protein; Start codon not provided; No significant database matches besides other Bordetellae.
       0.701
BAV1478
Putative phage protein; No significant database matches.
       0.701
BAV1479
Phage protein.
       0.701
BAV1480
Putative phage lysozyme.
       0.701
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.