cspA1 protein (Bordetella avium) - STRING interaction network

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Score

cspA1

Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424. (67 aa)

Predicted Functional Partners:

rpsL

0.503

rpsQ

0.494

rpsS

0.472

rplW

0.468

rpmC

0.463

rplO

0.448

rpmE2

0.429

wlbJK

0.424

BAV1493

0.412

rplC

0.410

Your Current Organism:

Bordetella avium

NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAV1493	cspA1	BAV1493	BAV1492	Conserved hypothetical protein.	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	0.412
cspA1	BAV1493	BAV1492	BAV1493	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	Conserved hypothetical protein.	0.412
cspA1	rplC	BAV1492	BAV0025	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.410
cspA1	rplO	BAV1492	BAV0053	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.448
cspA1	rplW	BAV1492	BAV0027	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.468
cspA1	rpmC	BAV1492	BAV0033	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.463
cspA1	rpmE2	BAV1492	BAV2408	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	50S ribosomal protein L31 type B-1; Belongs to the bacterial ribosomal protein bL31 family.	0.429
cspA1	rpsL	BAV1492	BAV0020	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.503
cspA1	rpsQ	BAV1492	BAV0034	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.494
cspA1	rpsS	BAV1492	BAV0029	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.472
cspA1	wlbJK	BAV1492	BAV0091	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	Putative membrane protein.	0.424
rplC	cspA1	BAV0025	BAV1492	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	0.410
rplC	rplO	BAV0025	BAV0053	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.998
rplC	rplW	BAV0025	BAV0027	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.999
rplC	rpmC	BAV0025	BAV0033	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.998
rplC	rpmE2	BAV0025	BAV2408	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L31 type B-1; Belongs to the bacterial ribosomal protein bL31 family.	0.903
rplC	rpsL	BAV0025	BAV0020	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.993
rplC	rpsQ	BAV0025	BAV0034	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.998
rplC	rpsS	BAV0025	BAV0029	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rplO	cspA1	BAV0053	BAV1492	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	Cold shock-like protein; Also similar to BAV2327, BAV1494, BAV2092 and BAV3424.	0.448